Beams
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"Longitudinal cooling of nonneutral plasma by energy exchange," J. Lee and J.R. Cary, Phys. Plasmas (2004) to be submitted, draft available.
"Finding a nonlinear lattice with improved integrability using Lie-transform perturbation theory," K. Sonnad and J. R. Cary, Phys. Rev. ST/AB (2004) in review.
"Particle-in-cell simulations of tunneling ionization effects in plasma-based accelerators," D.L. Bruhwiler, D.A. Dimitrov, J.R. Cary, E. Esarey, Wim Leemans and R.E. Giacone, Phys. Plasmas 10 (2003), p. 2022.
"Efficiency of a Boris-like integration scheme with spatial stepping," P.H. Stoltz, J.R. Cary, G. Penn, and J. Wurtele, Phys. Rev. ST/AB 5, 094001,1-9 (2002).
"Particle-in-cell simulations of plasma accelerators and electron-neutral collisions," D.L. Bruhwiler, R.E. Giacone, J.R. Cary, J.P. Verboncoeur, P. Mardahl, E. Esarey and W. P. Leeman, Phys. Rev. ST/AB 4, 101032 (2001).
"Finding four dimensional symplectic maps with reduced chaos," W.Wan and J.R. Cary, Phys. Rev. ST/AB 4, 084001 (2001).
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Computational Methods
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"VORPAL: a versatile plasma simulation code", C.P. Nieter and J.R. Cary, submitted to J. Comp. Phys. (2003).
"The OptSolve++ software components for nonlinear optimization and root finding," Computing in Object Oriented Parallel Environments, D.L. Bruhwiler, S.G. Shasharina and J.R. Cary, Lecture Notes in Computer Science 1732, 154-163 (1999).
"Comparison of C++ and Fortran 90 for object-oriented scientific programming," J.R. Cary, S.G. Shasharina, J.C. Cummings, J.V.W. Reynders, and P.J. Hinker, Comp. Phys. Comm 105, 20-36 (1997).
"Omnigenity and quasihelicity in helical plasma confinement systems," J.R. Cary and S.G. Shasharina, Phys. Plasma 4 (9), 3323-3333 (1997).
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Fusion Plasma
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"Physics of confinement improvement of plasmas with impurity injection in DIII-D," M. Murakami, G.R. McKee, G.L. Jackson, G.M. Staebler, D.A. Alexander, D.R. Baker, G. Bateman, L.R. Baylor, J.A. Boedo, N.H. Brooks, K.H. Burrell, J.R. Cary, R.H. Cohen, R.J. Colchin, J.C. DeBoo, E.J. Doyle, D.R. Ernst, T.E. Evans, C. Fenzi, C.M. Greenfield, D.E. Greenwood, R.J. Groebner, J.T. Hogan, W.A. Houlberg, A.W. Hyatt, R. Jayakumar, T.C. Jernigan, R.A. Jong, J.E. Kinsey, A.H. Kritz, R.J. La Haye, L.L. Lao, C.J. Lasnier, M.A. Makowski, J. Mandrekas, A.M. Messiaen, R.A. Moyer, J. Ongena, A. Pankin, T.W. Petrie, C.C. Petty, C.L. Rettig, T.L. Rhodes, B.W. Rice, D.W. Ross, J.C. Rost, S.G. Shasharina, H.E. St. John, W.M. Stacey, P.I. Strand, R.D. Sydora, T.S. Taylor, D.M. Thomas, M.R. Wade, R.E. Waltz, W.P. West, K.L. Wong, L. Zeng, DIII-D Team, Nuclear Fusion 41, 317-323 (2001).
"Omnigenous stellarators," J.R. Cary and S.G. Shasharina, Plasma Phys. Reps. 23 (6) 509-511 (1997).
"Omnigenity and quasihelicity in helical plasma confinement systems," J.R. Cary and S.G. Shasharina, Phys. Plasma 4 (9), 3323-3333 (1997).
"Helical plasma confinement devices with good confinement properties," J.R. Cary and S.G. Shasharina, Phys. Rev. Lett. 78 (5), 674-677 (1997).
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Other
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"Differentiating between colored random noise and deterministic chaos," B. Goode, J.R. Cary, I. Doxas, and W. Horton, J. Geophys. Res. 104, 21289 (2001).
"Numerical observation of turbulence enhanced growth rates," I. Doxas and J.R. Cary, Phys. Plasmas 4 (7), 2508-2518 (1997).
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